Endika, M. F., Barnett, D. J. M., Klostermann, C. E., Schols, H. A., Arts, I. C. W., Penders, J., Nauta, A., Smidt, H., & Venema, K. (2023). Microbiota-dependent influence of prebiotics on the resilience of infant gut microbiota to amoxicillin/clavulanate perturbation in an in vitro colon model.Frontiers in microbiology, 14(1), Article 1131953. https://doi.org/10.3389/fmicb.2023.1131953
Barnett, D. J. M., Endika, M. F., Klostermann, C. E., Gu, F., Thijs, C., Nauta, A., Schols, H. A., Smidt, H., Arts, I. C. W., & Penders, J. (2023). Human milk oligosaccharides, antimicrobial drugs, and the gut microbiota of term neonates: observations from the KOALA birth cohort study. Gut Microbes, 15(1), Article 2164152. https://doi.org/10.1080/19490976.2022.2164152
Bich, V. T. N., Le, N. G., Barnett, D., Chan, J., van Best, N., Tien, T. D., Anh, N. T. H., Hoang, T. H., van Doorn, H. R., Wertheim, H. F. L., & Penders, J. (2022). Moderate and transient impact of antibiotic use on the gut microbiota in a rural Vietnamese cohort. Scientific Reports, 12(1), Article 20189. https://doi.org/10.1038/s41598-022-24488-9
Aarnoutse, R., Ziemons, J., de Vos-Geelen, J., Valkenburg-van Iersel, L., Wildeboer, A. C. L., Vievermans, A., Creemers, G.-J. M., Baars, A., Vestjens, H. J. H. M. J., Le, G. N., Barnett, D. J. M., Rensen, S. S., Penders, J., & Smidt, M. L. (2022). The Role of Intestinal Microbiota in Metastatic Colorectal Cancer Patients Treated With Capecitabine. Clinical Colorectal Cancer, 21(2), E87-E97. https://doi.org/10.1016/j.clcc.2021.10.004
Barnett, D. J. M., Arts, I. C. W., & Penders, J. (2021). microViz: an R package for microbiome data visualization and statistics. Journal of Open Source Software, 6(63), 3201. https://doi.org/10.21105/joss.03201
Schneider, P. P., van Gool, C. J., Spreeuwenberg, P., Hooiveld, M., Donker, G. A., Barnett, D. J., & Paget, J. (2020). Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season. Eurosurveillance, 25(21), 13-22. https://doi.org/10.2807/1560-7917.ES.2020.25.21.1900221
Barnett, D., Mommers, M., Penders, J., Arts, I., & Thijs, C. (2019). Intestinal archaea inversely associated with childhood asthma. Journal of Allergy and Clinical Immunology, 143(6), 2305-2307. https://doi.org/10.1016/j.jaci.2019.02.009